R for Neuroscientists

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fNIRS & NIRS

fMRi, MRI, & qMRI

Visualization of MRI data in R

Added Sunday Dec 13th, 2020
What is this?

Description from site: In this blog post I present some functions which I was able to find for MRI visualization in R, and which I found to be very useful. All functions presented below presuppose an image in the NIfTI data format as input, and are very user-friendly.

Uses the oro.nifti package

  1. Link to blog here: https://www.alexejgossmann.com/MRI_viz/
  2. Same blog difference place: https://www.r-bloggers.com/2017/01/visualization-of-mri-data-in-r/

Processing fMRI Data in R

By John Muschelli

Added Sunday Dec 13th, 2020
What is this?

Slides created by John Muschelli for processing fMRI Data in R.

  1. Link to slides here: https://johnmuschelli.com/Neuroimaging_in_R/fmri_proc.html#1
  2. Link to repo here: https://github.com/muschellij2/Neuroimaging_in_R

EEG

All Neuro

neuropointillist

Added Sunday Dec 13th, 2020
What is this?

Description from site: Flexible modeling of neuroimaging data in R, point by point

  1. Link to site: http://ibic.github.io/neuropointillist/
  2. Content:

Neuroimaging Analysis within R

Added Sunday Dec 13th, 2020
What is this?

Series of slides with code for course on Neuroimaging Analysis: All the PDF slides are located in a zip file here.

  1. Link to site here: https://johnmuschelli.com/imaging_in_r/